CDS

Accession Number TCMCG007C05468
gbkey CDS
Protein Id XP_033134449.1
Location join(3695556..3696620,3697034..3697842,3697931..3698000)
Gene ARF16-1
GeneID 103852975
Organism Brassica rapa

Protein

Length 647aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033278558.1
Definition auxin response factor 16 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0035198        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048829        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061980        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATTAACGTTATGAATCCGATGAGAAGCGGATCAGAGAAGGGCTTAGATCCACAACTATGGCATGCGTGTGCTGGTGGCATGGTTCGTATGCCACCTATGAACTCCAAAGTCTTCTACTTCCCTCAAGGACACGCCGAGAACGCTTACGACCATGTCGATTTCAAGAACCTCCCTATCCCTCCTATGGTTCTATGTCGCGTCTTGGCCATCAAGTACATGGCCGACCCTGAATCCGACGAGGTTTTCGCCAAACTCAAACTGATTCCTCTAAAAGACAACGATCACGAGTACAGAGACGGCGAAGAGAGCAACGGTTTGGGGAGTAATAACAGCGAGAAAACGCCGTCGTTTGCAAAGACTCTGACTCAGTCAGATGCTAACAACGGTGGAGGGTTCTCTGTCCCGCGCTACTGCGCGGAGACGATCTTCCCGAGGCTGGATTACAACGCCGAGCCGCCTGTTCAGACCATTCTCGCGAAAGATGTTCACGGAGAGGTTTGGAAGTTTAGACATATCTACAGAGGGACGCCACGTCGGCATCTCCTCACGACCGGTTGGAGTAACTTCGTGAACCAGAAGAAGCTTGTTGCTGGAGACTCGATAGTCTTCATGAGAGCTGAGAATGGAGATCTTTGCGTAGGGATCAGGAGGGCTAAGAGAGGAGGGATCGGTAATAACGGACTCGAGTATTCAGCGGGTTGGAACCCTATTGGTGGAAGCTACTCTTCTCTTTTGAGAGATGATGAGAGGAGAAGTAGCTCTTCTCTTGCGGATAGAAAAGGAAAAGTGACGGCTGAGTCTGTTGTGGAAGCGGCTAAGCTTGCTGTTAGTGGAAGAGGTTTTGAAGTTGTGTACTATCCTAGGGCTAGCTCGTCTGAGTTTTGTGTCAAGGCGTTGGATGCTAGGGCTGCGATGAGGATACCTTGGTGCTCAGGTATGAGGTTTAAGATGGCGTTTGAGACGGAGGATTCTTCGAGGATTAGTTGGTTCATGGGGACTGTTTCAGCTGTTAGTGTCTCTGATCCTGTACGTTGGCCTAACTCTCCTTGGCGGCTTCTTCAGGTGGCGTGGGATGAGCCGGATCTACTCCAATACGTGAAGCGGGTTAACCCGTGGTTGGTCGAGTTGGTATCCAACGTACATCCGATAATCCCTTCGTTTTCGCCACCTAGGAAAAAGATGAGGCTACCTCAGCATCCGGATTACAACACTCGGATCTCAGTACCTTCATTCGCAAGCAACCCTCTTATCAGATCAAGCCCGTTAAGCTCTGTTCTGGACAATGTTCCCGTGGGTTTACAGGGAGCCAGGCATAATGCTCATCAGTACTACGGGCTATCATCTTCTGATCTCCACCATTACTACTTAAACCGACCTCATCCTCCTCCTCCATCATCAACTCTCTCTGTTCCTCCGCCTCTAGGGTTTCGAAACATCGATAGCAAAAACGAGAAAGGGTTCTGTTTCTTGACCATGGGGACATCACCGTGTAATGATACAGAATCTAAAAAGTCACACATCGTGTTGTTCGGAAAGCTCATACTACCCGAGGAGCAGAAAGGGTCAGAGAAGACGCAGCTTTCATCAGGCGGATCGAACCAGAACTGTGTTGCGGGTTCTTCATCAGAAGAAGGATCACCTTGCTCCAACAAAGCTCATGATGGATTGGGTTTGGAGACAGGGCATTGTAAAGTGTTTATGGAGTCGGACGATGTTGGTCGAACGTTAGACCTGTCGGTTCTTGGCTCGTACGAAGAGTTGGGTATGAAGCTCTCTGACATGTTTGGTATTCAAAAGTCTGAGATGTTGAGCTCTGTTCTCTATAGGGATGCATCAGGAGCAGTCAAGTACCCAGGAAACGAACCTTTCAGTGAGTTCTTGAAGACAGCTCGGAGATTGACGATTCTTTCTGAGCAAGGAAGCGAGAGCGTTGTGGTATAA
Protein:  
MINVMNPMRSGSEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDHVDFKNLPIPPMVLCRVLAIKYMADPESDEVFAKLKLIPLKDNDHEYRDGEESNGLGSNNSEKTPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNNGLEYSAGWNPIGGSYSSLLRDDERRSSSSLADRKGKVTAESVVEAAKLAVSGRGFEVVYYPRASSSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPVRWPNSPWRLLQVAWDEPDLLQYVKRVNPWLVELVSNVHPIIPSFSPPRKKMRLPQHPDYNTRISVPSFASNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLNRPHPPPPSSTLSVPPPLGFRNIDSKNEKGFCFLTMGTSPCNDTESKKSHIVLFGKLILPEEQKGSEKTQLSSGGSNQNCVAGSSSEEGSPCSNKAHDGLGLETGHCKVFMESDDVGRTLDLSVLGSYEELGMKLSDMFGIQKSEMLSSVLYRDASGAVKYPGNEPFSEFLKTARRLTILSEQGSESVVV